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paper-to-tools（纸张到工具）

Agent Skill

paper-to-tools 用于查找、检索和筛选相关信息，适合在 OpenClaw 中需要根据关键词、任务场景或来源线索快速定位候选结果时使用。可结合来源仓库、安装命令和原始 README 继续核验具体用法。安装前建议确认权限范围、维护状态，以及是否会触发联网、命令执行或文件读写。

总安装

3,906

周安装

158

GitHub Stars

公开资料未说明

下载量

1,226

OpenClaw

安装说明

本站只整理中文说明和来源信息，不托管安装包，也不代用户安装。

GitHub

来源数

许可证

MIT-0

最后核验

2026-05-01

来源状态

来源可访问

安装方式

通过对话安装

复制提示词发给支持本地命令或 Skills 的 AI 助手，先确认命令和权限，再让它执行。

请帮我安装这个 Agent Skill：paper-to-tools（纸张到工具）
来源仓库：https://github.com/johnnychen1113/paper-to-tools
安装命令：
openclaw skills install paper-to-tools
安装前请先检查当前环境是否支持对应 CLI，并向我确认将要执行的命令、安装目录、联网范围和文件读写权限；确认后再执行。

命令行安装

复制命令到本机终端执行。该命令会通过 OpenClaw 从第三方来源获取 Skill；本站只展示命令，不托管安装包，也不自动执行。

ClawHubOpenClaw

openclaw skills install paper-to-tools

简介

将论文方法论映射到可重现分析的 AI 代理工具。

支持 131+ 精选科学时代工具的匹配推荐。
基于关键词和方法论特征的智能工具匹配。适用宿主包括 OpenClaw，接入前应确认版本、权限和运行环境要求。
需要确认网络访问和工具集成权限。paper-to-tools 属于研究检索类 Skill，可作为该场景下的辅助能力补充。
建议核实工具可用性和 API 调用限制。

SKILL.md

name: paper-to-tools
description: |

Paper-to-Tools: Match Research Methods to AI Agents

Paste a paper abstract or methods section. Get a list of AI agents and skills that can help you reproduce or extend the analysis.

How It Works

User pastes a paper abstract, methods section, or describes an analysis pipeline
You extract methodology keywords (techniques, databases, data types, tools mentioned)
You match keywords against the mapping table below
You return 2-5 matched agents with installation instructions and links

Keyword-to-Agent Mapping

Sequence & Genomics

Keywords	Agent	Stars	What It Does
BLAST, sequence alignment, homology	BioClaw	318	PubMed search + PyMOL visualization, built-in BLAST skill
RNA-seq, differential expression, DESeq2	OmicsClaw	114	Multi-omics AI agent, scRNA-seq preprocessing
single-cell, scRNA-seq, clustering, trajectory	OmicsClaw	114	Single-cell analysis pipeline
CRISPR, gene editing, guide RNA	CRISPR-GPT	156	CRISPR experiment design
spatial transcriptomics, visium, MERFISH	SpatialAgent	158	Spatial omics analysis from Genentech
genome, variant calling, WGS, WES	BioMaster	91	Nucleome-scale genomic analysis

Drug Discovery & Chemistry

Keywords	Agent	Stars	What It Does
molecular docking, binding affinity, protein-ligand	BloClaw	1	RDKit + ESMFold + molecular docking pipeline
drug-target interaction, ADMET, pharmacology	DrugClaw	118	57 skills for DTI, ADR, DDI, drug repurposing
drug discovery, virtual screening	AIAgents4Pharma	76	End-to-end pharma AI agents
RDKit, SMILES, molecular descriptors	ChemClaw	32	Chemistry AI agent
molecular dynamics, MD simulation	MDCrow	234	Molecular dynamics agent
PyMOL, molecular visualization, protein structure	PyMolClaw	1	13 PyMOL scripts for publication figures
TCM, traditional chinese medicine, network pharmacology	TCM-Agent	10	TCM network pharmacology analysis

Protein & Structure

Keywords	Agent	Stars	What It Does
protein folding, AlphaFold, ESMFold, structure prediction	BloClaw	1	De novo 3D folding via ESMFold
protein-protein interaction, PPI network	BioDiscoveryAgent	102	Stanford bio discovery agent

Research Automation

Keywords	Agent	Stars	What It Does
literature review, systematic review, PubMed	BioClaw	318	PubMed integration
autonomous research, end-to-end	AutoResearchClaw	10608	Fully autonomous research pipeline
research agent, idea to paper	EvoScientist	2918	Evolutionary scientific discovery
paper writing, manuscript	Research Paper Writing Skills	1109	ML/CV/NLP paper writing skills
data analysis, statistics, visualization	RD-Agent	12372	Microsoft's research & development agent

Clinical & Medical

Keywords	Agent	Stars	What It Does
clinical trial, patient data, EHR	HealthClaw	293	Health copilot with clinical data support
medical imaging, radiology, pathology	HealthClaw	293	Medical imaging + omics evidence
biomedical data analysis, multi-tool	BioMedAgent	58	67 bioinformatics tools, Nature BME

How To Respond

When a user pastes paper content:

Extract keywords: Identify techniques, databases, data types, and tools mentioned
Match to agents: Use the mapping table above. Multiple matches are normal.
Rank by relevance: Put the most specific match first
Show installation: Include npx skills add or GitHub link for each
Link to directory: End with "Browse all 131+ science agents at claw4science.org"

Example

User: "We performed single-cell RNA-seq on tumor samples, followed by differential expression analysis and trajectory inference using Monocle3. Drug targets were validated through molecular docking with AutoDock Vina."

Response:

Based on your methods, here are the AI agents that can help:

OmicsClaw — scRNA-seq preprocessing, clustering, trajectory analysis

GitHub: TianGzlab/OmicsClaw · View on Claw4Science

BloClaw — Molecular docking pipeline (can replace AutoDock workflow)

GitHub: qinheming/BIoClaw · View on Claw4Science

DrugClaw — Drug-target interaction analysis and validation

GitHub: QSong-github/DrugClaw · View on Claw4Science

BioClaw — Literature search for related single-cell studies

GitHub: Runchuan-BU/BioClaw · View on Claw4Science

Browse all 131+ science agents at claw4science.org.

API Access

For programmatic access to the full project database:

curl -s "https://claw4science.org/api/projects"

Returns all projects with title, description, repo, group, tags, and stars.

适合场景

OpenClaw 用户查找和安装 Skill 时

用户想查找某类 Agent Skill 时

需要根据任务场景推荐可安装能力包时

需要对比不同来源的安装命令和来源信息时

能力概览

能力 1

按任务关键词查找相关 Skills

能力 2

展示可复制的安装命令

能力 3

保留来源站点、仓库和原始说明，方便继续核验

能力 4

补充不同宿主或平台的使用分布数据

能力 5

展示第三方安全扫描或审计结果

安装后应在对应宿主中按原始 README 的触发条件使用；具体调用方式请以来源页面和 README 为准。

平台分布

OpenClaw

77.43%

按下载量换算949

安全审计

VirusTotal

通过

ClawScan

通过

Static analysis

通过

权限和风险

需要联网

该 Skill 可能需要联网访问来源站点、仓库或外部 API；具体网络访问范围需要结合源码和 README 复核。

安装前确认

本站仅展示第三方公开信息，不托管安装包，不提供自动安装或运行环境。安装前应自行审查源码、依赖和命令行为。当前只有一个来源，正式发布前建议补源仓库或其他目录站核验。

来源信息

GitHub 仓库

github.com

/johnnychen1113/paper-to-tools

SKILL.md 来源

clawhub.ai