Academic Writing for Computer Science
Overview
This skill provides end-to-end support for writing high-quality computer science research papers. It focuses on constructing clear, compelling technical narratives while adhering to field-specific conventions.
Core Philosophy:
- Academic papers are narrative arcs (Problem → Solution → Evidence → Implications), not template fill-ins
- Clarity comes from structure: place familiar information first, new information last
- Every design choice must be justified; every claim must be supported
Scope:
- Conference papers (6-12 pages, competitive venues)
- Journal articles (15-30 pages, comprehensive)
- Thesis chapters (flexible length, deep coverage)
- All CS subfields: AI/ML, Systems, Theory, HCI, Security, etc.
When to Use This Skill
Invoke this skill when:
- Planning paper structure and narrative flow
- Drafting any section (Abstract, Introduction, Methods, Results, Discussion, Conclusion)
- Revising for clarity, coherence, or compliance with venue requirements
- Reviewing sentence-level writing for clarity issues
- Seeking CS-specific conventions (notation, figures, citations)
- Checking completeness with section-by-section quality checklists
- Responding to reviewer comments
Workflow Decision Tree
Stage 1: Planning and Structure
When starting a new paper or major revision:
- Define the Narrative Arc Reference:
references/narrative_framework.md— Read the "Core Principle" and "Section-Level Narrative Structure" sections to understand how to structure the paper's story.
- What problem does this solve, and why does it matter? (1-2 sentences) - What is the single main contribution? (1 sentence) - What are the 3 key results that support the contribution? - What are the main limitations?
- Identify Target Venue and Constraints Reference:
references/cs_conventions.md(Section 8: Venue-Specific Guidelines, Section 5: Subfield-Specific Conventions)
- Conference or journal? - Page limits, formatting requirements, anonymization rules? - Subfield conventions (ML vs. Systems vs. Theory)?
- Outline Section-by-Section Tool: Use
assets/section_checklists.md(Quick Pre-Draft Planning Checklist) to ensure all key questions are answered before writing begins.
- For each major section, define: - What is the purpose of this section? - What are the 2-3 key points to convey? - What figures/tables will support this?
Stage 2: Drafting
For each section, follow this process:
Abstract
- Use the 4-sentence structure: Context → Gap → Contribution → Impact
- Check against
assets/section_checklists.md(Abstract Checklist) - Ensure it's self-contained and within word limit (150-250 words)
Common mistakes:
- Vague contribution: "We improve X" → Be specific: "We achieve 15% higher accuracy"
- No concrete results: Always include numbers/metrics
Introduction
- Follow the funnel structure: Broad → Narrow → Specific
- Para 1: Problem domain and importance - Para 2-3: Specific problem, motivation, why existing work falls short - Para 4: Gap statement ("However, existing approaches lack...") - Para 5: Contribution overview (what this paper provides) - Para 6: Results summary (2-3 concrete findings) - Para 7: Paper organization (optional)
- Key requirement: By the end of paragraph 4-5, the reader must clearly understand the contribution.
- Include at least one figure (architecture or key result) for ML/systems papers.
- Check against
assets/section_checklists.md(Introduction Checklist)
Reference: references/narrative_framework.md (Introduction section) for detailed guidance and examples.
Related Work
- Organize thematically (not chronologically): Group into 3-5 categories
- For each category:
- Describe the general approach - Cite 3-5 representative works with 1-sentence descriptions - Point out limitations relevant to your contribution
- End with positioning paragraph: "In contrast to [X], our approach..."
- Clearly articulate differences and advantages
- Check against
assets/section_checklists.md(Related Work Checklist)
Common mistakes:
- Laundry list of citations without synthesis
- Failing to position your work relative to prior work
- Being dismissive (respect prior work while differentiating)
Methodology
- Dual objectives:
- Reproducibility: Enough detail for reimplementation - Intuition: Explain why the approach works
- Structure varies by paper type:
- ML/AI papers: Problem Formulation → Overview + Figure → Detailed Design → Implementation → Complexity - Systems papers: Architecture Overview → Component Design → Key Mechanisms → Implementation - Theory papers: Formal Definitions → Main Results (theorems) → Proof Sketch
- Always include:
- Clear notation (define all symbols on first use) - High-level overview before diving into details - Justification for design choices (or defer to Ablations)
- Check against
assets/section_checklists.md(Methodology Checklist)
Reference: references/narrative_framework.md (Methodology section) and references/cs_conventions.md (Section 1: Notation and Mathematical Writing)
Experiments/Results
- Experimental Setup (subsection):
- Datasets: Size, splits, preprocessing - Baselines: What you compare against (with citations) - Metrics: What you measure and why - Hardware/Software: Infrastructure and versions - Hyperparameters: How selected
- Main Results (subsection):
- Table/figure showing primary comparison - Text: "Table 1 shows that our method outperforms..." - Highlight key findings with concrete numbers - Report statistical significance (confidence intervals, p-values, or std dev)
- Ablation Studies (subsection, critical):
- Demonstrate necessity of each component - Table: effect of removing/modifying components
- Analysis (subsection):
- Where does the method excel? Where does it fail? - Qualitative analysis, error analysis, failure cases
- Computational Cost (if relevant):
- Training time, inference time, memory usage - Comparison with baselines
- Check against
assets/section_checklists.md(Experiments/Results Checklist)
Reference: references/narrative_framework.md (Experiments/Results section)
Discussion
- Summarize findings (1 para): Restate key results
- Interpret results (1-2 paras): Why does the method work? What insights?
- Acknowledge limitations (0.5-1 para): Be honest about scope and failure cases
- Broader implications (0.5-1 para): Impact on the field, applications, future directions
- Check against
assets/section_checklists.md(Discussion Checklist)
Tone: Balanced—confident but not overselling. Limitations increase credibility.
Conclusion
- Restate contribution (1 para): Recap problem, solution, key findings
- Broader impact (0.5 para): Significance and applications
- Future work (0.5 para): Open questions and extensions
- Phrase as opportunities: "An interesting direction is..." (not "In future work, we will...")
- Check against
assets/section_checklists.md(Conclusion Checklist)
Do NOT: Introduce new ideas, copy-paste Abstract, or be vague.
Stage 3: Revision for Clarity
After drafting, apply sentence-level clarity principles:
The Three Golden Rules (Gopen & Swan)
- Old Before New: Start sentences with familiar information; end with new information
- This creates coherent flow where each sentence builds on what came before
- Subject-Verb Proximity: Keep the verb close to the subject
- Long gaps between subject and verb strain comprehension
- Stress Position Power: Place the most important information at sentence end
- Readers remember and emphasize what comes at the end
Apply these rules systematically:
- For each paragraph, check that sentences flow (old-to-new)
- For each sentence, check that:
- Topic position (start) contains familiar info - Stress position (end) contains important new info - Verb appears soon after subject
Reference: references/sentence_clarity.md — Read this in full for detailed principles, examples, and common anti-patterns.
Practical Checklist:
- Familiar information at sentence start (topic position)
- Important new information at sentence end (stress position)
- Verb close to subject
- Active voice (unless passive is intentionally better)
- Parallel structures for parallel ideas
Common anti-patterns to fix:
- "Buried Verb" Syndrome: Converting verbs to nouns (nominalization)
- ❌ "The comparison of the methods is shown..." - ✅ "Table 1 compares the methods..."
- "Throat-Clearing": Weak starts like "It is important to note that..."
- ❌ "It is important to note that our method improves accuracy." - ✅ "Our method improves accuracy."
- "Dangling Emphasis": Ending sentences with weak elements
- ❌ "This approach significantly improves performance, as shown in [23]." - ✅ "As shown in [23], this approach significantly improves performance."
Stage 4: Polishing and Compliance
Language and Phrasing
When writing or revising specific academic functions, consult references/phrasebank.md:
- Introducing work: Establishing territory, identifying gaps, stating contributions
- Referring to sources: Integral vs. non-integral citations
- Describing methods: Sequential actions, conditional logic, implementation details
- Reporting results: Presenting findings, comparing baselines, interpreting
- Discussing findings: Explaining success, acknowledging limitations, stating implications
- Writing conclusions: Summarizing, broader impact, future work
General language functions:
- Being cautious (hedging): "may", "appears to", "likely"
- Being critical: Identifying weaknesses, questioning validity
- Compare and contrast: Similarity, difference
- Describing trends: Increasing, decreasing, stability
- Explaining causality: Causes, effects, conditions
Usage: Adapt templates to your context; don't copy verbatim. Vary expressions to maintain natural flow.
CS-Specific Conventions
Ensure compliance with field norms:
- Notation:
- Define all symbols on first use - Use consistent conventions (bold for vectors, italic for scalars, etc.) - Integrate equations into sentences with punctuation
- Figures and Tables:
- Reference all figures/tables in text before they appear - Self-contained captions - High-resolution, readable fonts (≥8pt) - Colorblind-friendly palettes
- Citations:
- Follow venue citation style (author-year or numbered) - Cite all prior work you build on or compare against - Accurate and complete bibliography
- Code and Reproducibility:
- State code availability - Provide sufficient implementation details - Report hyperparameters, random seeds, number of runs
- Subfield-Specific Variations:
- ML/AI: Emphasis on ablations, statistical significance, computational cost - Systems: Architecture diagrams, throughput/latency, scalability - Theory: Formal definitions, theorems, proofs, complexity bounds - HCI: User studies, qualitative feedback, interface screenshots - Security: Threat models, attack scenarios, defense mechanisms
Reference: references/cs_conventions.md — Comprehensive guide covering notation, figures, citations, code, subfield norms, and venue requirements.
Quality Assurance
Before submission, use assets/section_checklists.md:
- Section-by-Section Review:
- Run through each section's checklist - Ensure all required elements are present - Check for common pitfalls
- Pre-Submission Checklist:
- Content completeness (all sections, figures, citations) - Formatting (venue template, page limits, margins) - Anonymization (if double-blind) - Reproducibility (sufficient detail, code availability) - Final quality checks (spell-check, grammar, co-author review)
- Emergency Checklist (if deadline is imminent):
- Prioritize: Abstract, Introduction contribution statement, Main results table, At least one ablation, Readable figures, Correct bibliography
Stage 5: Responding to Reviews
After receiving reviewer feedback:
- Analyze comments systematically:
- Categorize: Major issues (experiments, clarity, claims) vs. Minor issues (typos, formatting) - Prioritize: Address major issues first
- Plan revisions:
- List all changes to be made - If experiments are requested, plan them carefully - If clarifications are needed, identify which sections to revise
- Revise and respond:
- Address every comment (in rebuttal or revision) - Use respectful, professional tone - Clearly mark changes (if required by venue)
- Check revised version:
- Ensure all changes are integrated - Re-run relevant checklists from assets/section_checklists.md (Revision Checklist) - Verify still within page limits
Reference: assets/section_checklists.md (Revision Checklist)
Key Resources Summary
Narrative and Structure
references/narrative_framework.md: Core paper structure (Abstract, Introduction, Related Work, Methods, Results, Discussion, Conclusion). Use for understanding the narrative arc and section-specific guidance.
Sentence-Level Clarity
references/sentence_clarity.md: Gopen & Swan principles (topic position, stress position, old-to-new flow). Use for revising individual sentences and paragraphs for maximum clarity.
Academic Phrases
references/phrasebank.md: Templates for common academic writing functions (introducing work, citing sources, reporting results, discussing findings). Use when drafting or seeking variation in phrasing.
CS Conventions
references/cs_conventions.md: Field-specific norms (notation, figures, citations, code, subfield variations, venue requirements). Use for ensuring compliance with CS writing standards.
Quality Checklists
assets/section_checklists.md: Comprehensive checklists for every section, plus pre-submission, revision, and emergency checklists. Use for planning, reviewing, and final quality assurance.
Example Workflows
Workflow 1: Starting from Scratch
User: "I need to write a conference paper on my new semi-supervised learning method."
Process:
- Planning (Stage 1):
- Define narrative arc: Problem (labeled data is expensive) → Solution (our semi-supervised method) → Evidence (experiments on 3 datasets) → Implications (reduces labeling cost) - Read references/narrative_framework.md (Core Principle) - Use assets/section_checklists.md (Quick Pre-Draft Planning Checklist)
- Drafting (Stage 2):
- Abstract: 4-sentence structure (Context: deep learning needs data; Gap: labeling is expensive; Contribution: our method STCR; Impact: 82% accuracy with 10% labels) - Introduction: Funnel (broad: DL success → narrow: labeling cost → gap: existing semi-supervised methods lack X → contribution: STCR leverages consistency → results: 7% improvement) - Check each section against assets/section_checklists.md
- Revision (Stage 3):
- Apply references/sentence_clarity.md principles to every paragraph - Ensure old-to-new flow, stress position usage
- Polishing (Stage 4):
- Use references/phrasebank.md for varied phrasing - Ensure compliance with references/cs_conventions.md (ML/AI conventions) - Run Pre-Submission Checklist from assets/section_checklists.md
Workflow 2: Revising for Clarity
User: "My introduction is confusing. Reviewers said they couldn't understand the contribution."
Process:
- Diagnose issue:
- Check against assets/section_checklists.md (Introduction Checklist) - Is the contribution stated clearly by paragraph 4-5? - Is the funnel structure followed (broad → narrow)?
- Restructure if needed:
- Read references/narrative_framework.md (Introduction section) - Ensure: Opening → Background → Gap → Contribution → Results → Organization - Explicitly state: "In this paper, we present [X], which addresses [Y] by [Z]."
- Revise at sentence level:
- Apply references/sentence_clarity.md principles - Check that each sentence flows from the previous one (old-to-new) - End key sentences with the important information (stress position)
Workflow 3: Drafting the Results Section
User: "How should I present my experimental results?"
Process:
- Structure:
- Read references/narrative_framework.md (Experiments/Results section) - Follow: Setup → Main Results → Ablations → Analysis → Cost
- Create tables/figures:
- Main results table: Methods (rows) vs. Metrics (columns) - Bold best results; include standard deviations - Check references/cs_conventions.md (Figures and Tables section)
- Write accompanying text:
- "Table 1 shows that our method achieves X, outperforming the strongest baseline by Y%." - Use references/phrasebank.md (Section 4: Reporting Results) for phrasing
- Quality check:
- Run through assets/section_checklists.md (Experiments/Results Checklist) - Ensure: Statistical significance, Ablations present, Analysis included
Workflow 4: Ensuring CS Compliance
User: "Is my notation and citation style correct for ICML?"
Process:
- Check venue requirements:
- Read references/cs_conventions.md (Section 8: Venue-Specific Guidelines) - ICML uses numbered citations [1], double-blind review, LaTeX template
- Notation:
- Read references/cs_conventions.md (Section 1: Notation and Mathematical Writing) - Ensure: Vectors are bold, scalars are italic, all symbols defined
- Citations:
- Read references/cs_conventions.md (Section 3: Citations and References) - Use numbered format: "Method X [1] achieves..." - Anonymize self-citations for double-blind
- Final check:
- assets/section_checklists.md (Pre-Submission Checklist → Compliance section)
Common Pitfalls and How to Avoid Them
Pitfall 1: Vague Contributions
Problem: "We improve performance on X." Solution: Be specific. "We achieve 15% higher accuracy than the strongest baseline on ImageNet."
Pitfall 2: Missing Ablations
Problem: Claiming design choices are important without evidence. Solution: Include ablation studies. Remove each component and measure the performance drop.
Pitfall 3: Poor Information Flow
Problem: Sentences feel disjointed; readers get lost. Solution: Apply old-to-new flow. Each sentence should start with information from the previous sentence. Reference: references/sentence_clarity.md
Pitfall 4: Weak Stress Position
Problem: Sentences end with citations or minor details. Example: ❌ "This approach significantly improves performance, as shown in [23]." Solution: ✅ "As shown in [23], this approach significantly improves performance."
Pitfall 5: Ignoring Limitations
Problem: Overselling without acknowledging scope or failure cases. Solution: Dedicate a paragraph in Discussion to honest limitations. This increases credibility.
Pitfall 6: Inconsistent Notation
Problem: Using x for input in one section, X in another. Solution: Define all notation upfront. Create a notation table (appendix) if needed. Reference: references/cs_conventions.md (Section 1)
Tips for Efficient Writing
- Draft quickly, revise thoroughly:
- Don't aim for perfection in the first draft - Get ideas down, then refine structure and clarity
- Write sections out of order:
- Start with Methods and Results (most concrete) - Then Introduction and Related Work - Finally Abstract and Conclusion
- Use figures early:
- Create key figures (architecture, main results) before writing - Figures clarify your thinking and guide the narrative
- Get feedback early:
- Share drafts with co-authors and colleagues - Mock reviews identify issues before submission
- Iterate on structure:
- If a section feels wrong, revisit the narrative arc - Ensure every section advances Problem → Solution → Evidence → Implications
- Use the checklists proactively:
- Before drafting a section, read the checklist to know what to include - After drafting, use the checklist to verify completeness
Advanced: Handling Special Cases
Writing for Top-Tier Venues
- Higher bar for novelty and rigor: Ensure the contribution is significant, not incremental
- Strong baselines: Compare against state-of-the-art, not just simple methods
- Comprehensive evaluation: Multiple datasets, extensive ablations, sensitivity analyses
- Polished presentation: High-quality figures, clear writing, consistent notation
Writing Rebuttals
- Address all concerns: Even if you disagree, engage respectfully
- Provide evidence: If reviewers doubt a claim, provide additional results or citations
- Be concise: Rebuttals have strict length limits; prioritize major issues
- Highlight changes: "We added an experiment (Table 3) showing..."
Writing Thesis Chapters
- More comprehensive: Deeper background, extended related work, lessons learned
- Narrative continuity: Ensure chapters connect (e.g., Chapter 3 builds on Chapter 2)
- Broader scope: Can include negative results and explorations that didn't pan out
- Use
assets/section_checklists.md(Long-Form Paper Checklist)
Summary: The Golden Workflow
- Plan the narrative: Problem → Solution → Evidence → Implications
- Draft section-by-section: Use structure guidelines from
references/narrative_framework.md - Revise for clarity: Apply principles from
references/sentence_clarity.md - Polish and comply: Use
references/phrasebank.mdandreferences/cs_conventions.md - Quality check: Run through
assets/section_checklists.md
Remember:
- Papers are stories, not templates
- Clarity comes from structure (old-to-new, topic/stress positions)
- Every claim needs evidence; every design choice needs justification
- Honest limitations increase credibility
When in doubt, ask:
- "Does this advance the narrative arc?"
- "Can a reader reproduce this?"
- "Is this claim supported?"
- "Is this the simplest, clearest way to express this?"
Getting Started
For a new paper:
- Read
references/narrative_framework.md(Core Principle) - Use
assets/section_checklists.md(Quick Pre-Draft Planning Checklist) - Outline your paper's narrative arc in 4 sentences (Problem, Solution, Evidence, Implications)
- Draft section-by-section, checking checklists as you go
For revising an existing draft:
- Identify the issue (structure, clarity, compliance)
- Consult the relevant reference file
- Apply fixes systematically
- Re-check with the appropriate checklist
For sentence-level issues:
- Read
references/sentence_clarity.md(Three Golden Rules) - Apply to each problematic paragraph
- Check: Old-to-new flow, stress position usage, subject-verb proximity
Ready to write? Let's build a clear, compelling paper together.